BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016H03LP1|AL427078
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1001 1735 0.0
>3x_Contig1001
Length = 4198
Score = 1735 bits (863), Expect = 0.0
Identities = 910/939 (96%)
Strand = Plus / Minus
Query: 1 acaaaagcgatgcgatatctatcgaataagaaaaamattaccactttttgttcgttgtat 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3967 acaaaagcgatgcgatatctatcgaataagaaaaaaattaccactttttgttcgttgtat 3908
Query: 61 ttcgctcaagtcttcaaattacaaacttcaaccgttattttgcaagcmaaccttagaata 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3907 ttcgctcaagtcttcaaattacaaacttcaaccgttattttgcaagcaaaccttagaata 3848
Query: 121 tagatatgttcctaacggatgtcacgtggatggttcaggaaammmagggaaatattgaat 180
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 3847 tagatatgttcctaacggatgtaacgtggatggttcaggaaaaaaagggaaatattgaat 3788
Query: 181 tgtaatgaatcaataamatctgtattaaatgaattgatgamatgaaatcgctaatattaa 240
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3787 tgtaatgaatcaataaaatctgtattaaatgaattgatgaaatgaaatcgctaatattaa 3728
Query: 241 tmamagcmacacaacagggggaaaacactcttactcaagccagtcaattagtcccttgcm 300
| | ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3727 taaaagcaacacaacagggggaaaacactcttactcaagcaagtcaattagtcccttgca 3668
Query: 301 acaagtgatgcagcagtgtctatcatgtttcttcgcagtaaattcttcgcgctgcaatcg 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3667 acaagtgatgcagcagtgtctataatgtttcttcgcagtaaattcttcgcgctgcaatcg 3608
Query: 361 ctcggcaaattcaacaactagaagttcccagaacttaaacgtttgagcacccttagcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3607 ctcggcaaattcaacaactagaagttcccagaacttaaacgtttgagcacccttagcagt 3548
Query: 421 gttgtgtccgttatcagagaccctatttgttactttgamacaaggttctggtttattttt 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3547 gttgtgtccgttatcagagaccctatttgttactttgaaacaaggttctggtttattttt 3488
Query: 481 tgtttgttttttcctaatttcctaamactaamattgattttcatattcggttttccaaga 540
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 3487 tgtttgttttttcctaatttcctaaaactaaaattgattttcatattcggttttccaaga 3428
Query: 541 mtctgatatcaatatgactgactgactactgactgagttacacmattattgataacmgcg 600
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 3427 atctgatatcaatatgactgactgactactgactgagttacacaattattgataaaagcg 3368
Query: 601 atatamcagacgttctaattgagggaacgttccaaacaamatttcattctaagatctccc 660
||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 3367 atataaaagacgttctaattgagggaacgttccaaacaaaatttaattctaagatctccc 3308
Query: 661 agagccagcttttatgaagttcgactctgagagtactacactctctctagatatgaatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3307 agagccagcttttatgaagttcgactctgagagtactacactctctctagatatgaatgc 3248
Query: 721 acaaacgagttaaaattggcatttatagcattaatgaggaattactcaggttcaggtcct 780
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3247 acaaacgaagttaaattggcatttatagcattaatgaggaattactcaggttcaggtcct 3188
Query: 781 atatcctccacctgaactttctcttgattgtagcatcaagttgtagaaatggtttgggga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3187 atatcctccacctgaactttctcttgattgtagcatcaagttgtagaaatggtttgggga 3128
Query: 841 atgcgaggtgatcttcgccagtctgcatataatatttctatcaaatgtttaccccatcgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3127 atgcgaggtgatcttcgccagtctgcatataatatttctatcaaatgtttaccccatcgc 3068
Query: 901 atctcggsactctttatcaacgtgatatcttccgccagt 939
||||||| |||||||||||||||||||||||||||||||
Sbjct: 3067 atctcggcactctttatcaacgtgatatcttccgccagt 3029
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5834
Number of Sequences: 1807
Number of extensions: 5834
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)